Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PARPBPQ9NWS1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 MKNK2P1-201ENST00000437526 628 ntBASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PARPBPQ9NWS1 AC006538.1-201ENST00000567905 1585 ntBASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 AC011676.5-201ENST00000624864 2660 ntBASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 AL118508.1-201ENST00000613502 2345 ntBASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 YBX2P1-201ENST00000394192 760 ntBASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 AC005829.1-201ENST00000570002 483 ntBASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 AL009183.1-201ENST00000603760 355 ntBASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.81□□□□□ -0.04
PARPBPQ9NWS1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PARPBPQ9NWS1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms