Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC009947.2-201ENST00000444014 672 ntBASIC19.63■□□□□ 0.73
RTN4Q9NQC3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 CICP8-201ENST00000455800 2813 ntBASIC19.63■□□□□ 0.73
RTN4Q9NQC3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 AC118758.2-201ENST00000614242 2813 ntBASIC19.62■□□□□ 0.73
RTN4Q9NQC3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 LSINCT5-201ENST00000626215 2647 ntBASIC19.62■□□□□ 0.73
RTN4Q9NQC3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 AL355075.4-201ENST00000554988 638 ntBASIC19.62■□□□□ 0.73
RTN4Q9NQC3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 AC008687.5-201ENST00000593746 558 ntBASIC19.62■□□□□ 0.73
RTN4Q9NQC3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 REXO1L11P-201ENST00000620964 1927 ntBASIC19.62■□□□□ 0.73
RTN4Q9NQC3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4Q9NQC3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 AL031432.4-201ENST00000641729 2190 ntBASIC19.61■□□□□ 0.73
RTN4Q9NQC3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.61■□□□□ 0.73
RTN4Q9NQC3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4Q9NQC3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms