Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AC093724.1-201ENST00000448659 1027 ntBASIC16.51■□□□□ 0.23
MRM3Q9HC36 KRT18P34-201ENST00000488218 1270 ntBASIC16.51■□□□□ 0.23
MRM3Q9HC36 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 AL078644.1-201ENST00000609881 752 ntBASIC16.51■□□□□ 0.23
MRM3Q9HC36 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRM3Q9HC36 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRM3Q9HC36 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRM3Q9HC36 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRM3Q9HC36 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRM3Q9HC36 ZNF259P1-201ENST00000407656 1365 ntBASIC16.51■□□□□ 0.23
MRM3Q9HC36 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MRM3Q9HC36 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRM3Q9HC36 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 AC007950.2-201ENST00000615045 2347 ntBASIC16.5■□□□□ 0.23
MRM3Q9HC36 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 KRT18P58-201ENST00000527480 1120 ntBASIC16.5■□□□□ 0.23
MRM3Q9HC36 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 AC004877.2-201ENST00000623941 599 ntBASIC16.5■□□□□ 0.23
MRM3Q9HC36 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.5■□□□□ 0.23
MRM3Q9HC36 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRM3Q9HC36 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 BCAR1-209ENST00000546196 1340 ntBASIC16.49■□□□□ 0.23
MRM3Q9HC36 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 KRT19P2-202ENST00000557173 1012 ntBASIC16.49■□□□□ 0.23
MRM3Q9HC36 AC106730.1-201ENST00000566722 1090 ntBASIC16.49■□□□□ 0.23
MRM3Q9HC36 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.49■□□□□ 0.23
MRM3Q9HC36 AC025580.3-201ENST00000617932 1424 ntBASIC16.49■□□□□ 0.23
MRM3Q9HC36 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRM3Q9HC36 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms