Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 GNAQP1-201ENST00000444815 1067 ntBASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AL844908.2-201ENST00000609461 460 ntBASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AP001350.2-201ENST00000625104 1094 ntBASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AC004840.1-201ENST00000636359 365 ntBASIC19.19■□□□□ 0.66
EFCC1Q9HA90 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 AL035456.1-201ENST00000456064 1369 ntBASIC19.19■□□□□ 0.66
EFCC1Q9HA90 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 AC080080.1-201ENST00000625121 2420 ntBASIC19.18■□□□□ 0.66
EFCC1Q9HA90 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 AC105233.2-201ENST00000523697 349 ntBASIC19.18■□□□□ 0.66
EFCC1Q9HA90 AF228730.5-201ENST00000530288 346 ntBASIC19.18■□□□□ 0.66
EFCC1Q9HA90 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 MIR4525-201ENST00000580000 75 ntBASIC19.18■□□□□ 0.66
EFCC1Q9HA90 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EFCC1Q9HA90 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 FLJ38576-201ENST00000623820 2459 ntBASIC19.17■□□□□ 0.66
EFCC1Q9HA90 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 AC093525.9-201ENST00000624961 1746 ntBASIC19.17■□□□□ 0.66
EFCC1Q9HA90 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 AD000864.1-201ENST00000624076 2295 ntBASIC19.17■□□□□ 0.66
EFCC1Q9HA90 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 AC135586.1-201ENST00000539323 574 ntBASIC19.17■□□□□ 0.66
EFCC1Q9HA90 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.17■□□□□ 0.66
EFCC1Q9HA90 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 CETN4P-206ENST00000642099 2168 ntBASIC19.16■□□□□ 0.66
EFCC1Q9HA90 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCC1Q9HA90 FAM8A2P-201ENST00000528813 1142 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms