Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 RHOQP3-201ENST00000437982 621 ntBASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 AC006449.6-201ENST00000612330 2296 ntBASIC16.79■□□□□ 0.28
LRRC40Q9H9A6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AC008741.2-201ENST00000612792 3115 ntBASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AC145285.3-201ENST00000564603 959 ntBASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AC007064.4-201ENST00000637740 555 ntBASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AL596087.1-201ENST00000400979 1969 ntBASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC40Q9H9A6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 AC023141.13-201ENST00000604991 943 ntBASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC40Q9H9A6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 AC008894.3-201ENST00000624324 3103 ntBASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms