Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 YBX1P6-201ENST00000442962 1002 ntBASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 ANO7L1-203ENST00000602586 1720 ntBASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNTNAP3Q9BZ76 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 AC005077.2-201ENST00000449786 690 ntBASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 AC105233.2-201ENST00000523697 349 ntBASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 AF228730.5-201ENST00000530288 346 ntBASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 AL512361.1-201ENST00000554200 418 ntBASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 AL079307.3-201ENST00000556114 283 ntBASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 RN7SL560P-201ENST00000577943 264 ntBASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 AC005412.3-201ENST00000580309 715 ntBASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNTNAP3Q9BZ76 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 PRORSD1P-202ENST00000563365 2154 ntBASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNTNAP3Q9BZ76 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms