Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC104564.3-201ENST00000582367 638 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 BNIP3P8-201ENST00000597863 560 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 VN1R82P-201ENST00000601481 356 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC073387.2-201ENST00000604797 784 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC068631.1-208ENST00000626649 667 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC068733.2-201ENST00000605434 1418 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 UTY-204ENST00000382893 1539 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 MTCO1P23-201ENST00000415223 1526 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 HLA-J-201ENST00000462773 1622 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC234775.2-201ENST00000392722 1792 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 TRPM3-207ENST00000377101 2075 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC130710.1-201ENST00000412381 642 ntTSL 3 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AL513175.2-201ENST00000422071 443 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC073614.1-201ENST00000438690 650 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC074121.1-201ENST00000441836 348 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 DSTNP2-201ENST00000504533 515 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ANP32C-201ENST00000512835 705 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 MAJIN-204ENST00000530444 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC009121.1-201ENST00000574681 1095 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC01535-204ENST00000591116 815 ntTSL 3 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 DAZAP2-215ENST00000604900 1045 ntTSL 3 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ZNF75A-209ENST00000612186 1118 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 OR10J1-202ENST00000641630 1089 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC009055.2-201ENST00000567058 1337 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AL160408.1-201ENST00000417805 1373 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 DHFR-205ENST00000511032 1474 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC018553.1-201ENST00000616682 1458 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 SGO1P2-201ENST00000429458 1589 ntBASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ZMAT2-201ENST00000274712 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-3Q9BYR6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC01006-201ENST00000333319 2292 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms