Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MIR600HG-201ENST00000449175 5984 ntBASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 AC009336.1-201ENST00000608941 1553 ntBASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 NEK4P2-201ENST00000580004 1012 ntBASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 FAM197Y4-202ENST00000622692 608 ntBASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 AC073912.3-201ENST00000624414 853 ntBASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 AL139011.1-202ENST00000642063 584 ntBASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 AL391807.1-203ENST00000604392 2365 ntBASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 AC007292.2-201ENST00000593524 1812 ntBASIC14□□□□□ -0.17
SEC22CQ9BRL7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 INGX-201ENST00000359239 846 ntBASIC14□□□□□ -0.17
SEC22CQ9BRL7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 STK19B-204ENST00000512515 211 ntBASIC14□□□□□ -0.17
SEC22CQ9BRL7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 AC079602.3-201ENST00000623931 403 ntBASIC14□□□□□ -0.17
SEC22CQ9BRL7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SEC22CQ9BRL7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 AC006277.1-201ENST00000624348 1610 ntBASIC14□□□□□ -0.17
SEC22CQ9BRL7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14□□□□□ -0.17
SEC22CQ9BRL7 DKFZP434H168-201ENST00000567381 1905 ntBASIC14□□□□□ -0.17
SEC22CQ9BRL7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms