Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 AC092580.3-201ENST00000430932 139 ntBASIC19.16■□□□□ 0.66
SLF1Q9BQI6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 AC138761.1-201ENST00000584393 385 ntBASIC19.16■□□□□ 0.66
SLF1Q9BQI6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.15■□□□□ 0.66
SLF1Q9BQI6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 AC003101.2-201ENST00000612557 442 ntBASIC19.15■□□□□ 0.66
SLF1Q9BQI6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLF1Q9BQI6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.14■□□□□ 0.66
SLF1Q9BQI6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLF1Q9BQI6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLF1Q9BQI6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLF1Q9BQI6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.14■□□□□ 0.66
SLF1Q9BQI6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 HLA-H-201ENST00000383620 1096 ntBASIC19.14■□□□□ 0.65
SLF1Q9BQI6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 COX20P2-201ENST00000452636 358 ntBASIC19.14■□□□□ 0.65
SLF1Q9BQI6 UGT1A2P-201ENST00000454886 866 ntBASIC19.14■□□□□ 0.65
SLF1Q9BQI6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 AC007967.4-201ENST00000614700 386 ntBASIC19.14■□□□□ 0.65
SLF1Q9BQI6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 AC018695.7-201ENST00000624587 2492 ntBASIC19.14■□□□□ 0.65
SLF1Q9BQI6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLF1Q9BQI6 AL391256.1-201ENST00000443260 1855 ntBASIC19.14■□□□□ 0.65
SLF1Q9BQI6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLF1Q9BQI6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms