Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NPAS2Q99743 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 AC023824.1-201ENST00000562945 2975 ntBASIC16.24■□□□□ 0.19
NPAS2Q99743 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 AL596087.1-201ENST00000400979 1969 ntBASIC16.24■□□□□ 0.19
NPAS2Q99743 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 AC148477.5-201ENST00000625164 1645 ntBASIC16.23■□□□□ 0.19
NPAS2Q99743 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS2Q99743 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS2Q99743 HLA-J-202ENST00000469281 1241 ntBASIC16.23■□□□□ 0.19
NPAS2Q99743 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 IGHV3-22-201ENST00000520721 359 ntBASIC16.23■□□□□ 0.19
NPAS2Q99743 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS2Q99743 AL022326.1-202ENST00000641533 845 ntBASIC16.23■□□□□ 0.19
NPAS2Q99743 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS2Q99743 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NPAS2Q99743 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS2Q99743 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS2Q99743 AP002414.3-201ENST00000589352 1468 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 AC092850.2-201ENST00000623821 2697 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS2Q99743 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NPAS2Q99743 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.22■□□□□ 0.19
NPAS2Q99743 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
NPAS2Q99743 AC010491.1-201ENST00000563101 2797 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NPAS2Q99743 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NPAS2Q99743 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS2Q99743 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 RPS2P28-201ENST00000314255 741 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS2Q99743 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS2Q99743 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS2Q99743 RPL13AP23-201ENST00000480739 586 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 AC092910.1-201ENST00000482027 1129 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.22■□□□□ 0.19
NPAS2Q99743 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.22■□□□□ 0.19
NPAS2Q99743 AC106730.1-201ENST00000566722 1090 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.22■□□□□ 0.19
NPAS2Q99743 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NPAS2Q99743 AC008735.5-201ENST00000623544 497 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 LINC00895-201ENST00000629028 1637 ntBASIC16.22■□□□□ 0.19
NPAS2Q99743 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NPAS2Q99743 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS2Q99743 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NPAS2Q99743 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms