Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 HLA-H-201ENST00000383620 1096 ntBASIC15.99■□□□□ 0.15
SLC38A3Q99624 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.99■□□□□ 0.15
SLC38A3Q99624 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.99■□□□□ 0.15
SLC38A3Q99624 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 SPTSSB-204ENST00000617024 1292 ntBASIC15.99■□□□□ 0.15
SLC38A3Q99624 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC38A3Q99624 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC38A3Q99624 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 AL158211.3-201ENST00000607385 239 ntBASIC15.98■□□□□ 0.15
SLC38A3Q99624 AL390754.1-201ENST00000619088 582 ntBASIC15.98■□□□□ 0.15
SLC38A3Q99624 AJ011932.1-201ENST00000621707 465 ntBASIC15.98■□□□□ 0.15
SLC38A3Q99624 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC38A3Q99624 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC38A3Q99624 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 AL512638.1-201ENST00000457493 794 ntBASIC15.97■□□□□ 0.15
SLC38A3Q99624 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 MIR4745-201ENST00000577608 62 ntBASIC15.97■□□□□ 0.15
SLC38A3Q99624 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC38A3Q99624 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC38A3Q99624 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC38A3Q99624 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC38A3Q99624 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC38A3Q99624 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC38A3Q99624 AL645608.8-201ENST00000606034 2086 ntBASIC15.96■□□□□ 0.15
SLC38A3Q99624 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC38A3Q99624 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC38A3Q99624 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC38A3Q99624 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms