Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 AC078925.2-201ENST00000624013 1973 ntBASIC12.57□□□□□ -0.4
AP1S3Q96PC3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 AL353692.3-201ENST00000407031 1396 ntBASIC12.56□□□□□ -0.4
AP1S3Q96PC3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 COX5BP2-201ENST00000392354 334 ntBASIC12.56□□□□□ -0.4
AP1S3Q96PC3 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.56□□□□□ -0.4
AP1S3Q96PC3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 AP003733.1-201ENST00000491725 852 ntBASIC12.56□□□□□ -0.4
AP1S3Q96PC3 AP002490.2-201ENST00000524791 560 ntBASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ZNF444P1-201ENST00000559497 298 ntBASIC12.56□□□□□ -0.4
AP1S3Q96PC3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 AC140113.3-201ENST00000605663 199 ntBASIC12.56□□□□□ -0.4
AP1S3Q96PC3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 EGFEM1P-202ENST00000431685 1563 ntBASIC12.56□□□□□ -0.4
AP1S3Q96PC3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP1S3Q96PC3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 AC144831.1-201ENST00000573312 2656 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 KRT8P9-201ENST00000558927 1449 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 CYP2T1P-202ENST00000641596 2535 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms