Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC021087.4-201ENST00000563761 564 ntBASIC17.07■□□□□ 0.32
C9orf72Q96LT7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 AL353135.1-201ENST00000606729 504 ntBASIC17.07■□□□□ 0.32
C9orf72Q96LT7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 AL512652.2-201ENST00000625156 1716 ntBASIC17.07■□□□□ 0.32
C9orf72Q96LT7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
C9orf72Q96LT7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 DBET-201ENST00000630918 3363 ntBASIC17.06■□□□□ 0.32
C9orf72Q96LT7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 HNRNPDP1-201ENST00000439535 754 ntBASIC17.06■□□□□ 0.32
C9orf72Q96LT7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 AL139288.1-201ENST00000623748 933 ntBASIC17.06■□□□□ 0.32
C9orf72Q96LT7 FAM215A-202ENST00000632077 792 ntBASIC17.06■□□□□ 0.32
C9orf72Q96LT7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.06■□□□□ 0.32
C9orf72Q96LT7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf72Q96LT7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 GGT4P-201ENST00000623672 1708 ntBASIC17.05■□□□□ 0.32
C9orf72Q96LT7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 AL049840.3-201ENST00000602669 611 ntBASIC17.05■□□□□ 0.32
C9orf72Q96LT7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 MIR7706-201ENST00000613747 67 ntBASIC17.05■□□□□ 0.32
C9orf72Q96LT7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf72Q96LT7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms