Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.37■□□□□ 0.37
SUSD3Q96L08 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.37■□□□□ 0.37
SUSD3Q96L08 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.37■□□□□ 0.37
SUSD3Q96L08 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.37■□□□□ 0.37
SUSD3Q96L08 AL365330.1-201ENST00000607459 531 ntBASIC17.37■□□□□ 0.37
SUSD3Q96L08 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SUSD3Q96L08 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SUSD3Q96L08 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.37■□□□□ 0.37
SUSD3Q96L08 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.37■□□□□ 0.37
SUSD3Q96L08 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SUSD3Q96L08 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 AC080080.1-201ENST00000625121 2420 ntBASIC17.36■□□□□ 0.37
SUSD3Q96L08 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 SERBP1P5-201ENST00000510079 1181 ntBASIC17.36■□□□□ 0.37
SUSD3Q96L08 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 AC009407.1-201ENST00000568958 598 ntBASIC17.36■□□□□ 0.37
SUSD3Q96L08 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SUSD3Q96L08 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.36■□□□□ 0.37
SUSD3Q96L08 AC106886.4-201ENST00000623557 2502 ntBASIC17.36■□□□□ 0.37
SUSD3Q96L08 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 AC022211.2-201ENST00000585075 2527 ntBASIC17.35■□□□□ 0.37
SUSD3Q96L08 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 SPDYE17-201ENST00000412399 783 ntBASIC17.35■□□□□ 0.37
SUSD3Q96L08 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 MIR4321-201ENST00000592276 80 ntBASIC17.35■□□□□ 0.37
SUSD3Q96L08 AC009118.2-201ENST00000613275 655 ntBASIC17.35■□□□□ 0.37
SUSD3Q96L08 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUSD3Q96L08 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.35■□□□□ 0.37
SUSD3Q96L08 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SUSD3Q96L08 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SUSD3Q96L08 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUSD3Q96L08 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SUSD3Q96L08 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUSD3Q96L08 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
SUSD3Q96L08 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SUSD3Q96L08 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms