Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 FAM197Y3-203ENST00000618346 717 ntBASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 AL161645.1-201ENST00000622716 1255 ntBASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 AC024909.3-201ENST00000611513 2257 ntBASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
PDLIM5Q96HC4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 AP002472.1-201ENST00000577490 586 ntBASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 AL121894.2-201ENST00000602977 491 ntBASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 AC068137.2-201ENST00000605408 478 ntBASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 AC027601.4-201ENST00000611259 610 ntBASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 WASH6P-202ENST00000359512 1437 ntBASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDLIM5Q96HC4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 AC016027.1-202ENST00000607927 1699 ntBASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms