Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 AL359711.2-201ENST00000563105 872 ntBASIC19.06■□□□□ 0.64
CDCA5Q96FF9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 AC008764.6-201ENST00000595909 2069 ntBASIC19.05■□□□□ 0.64
CDCA5Q96FF9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 BCL2-203ENST00000589955 5011 ntBASIC19.05■□□□□ 0.64
CDCA5Q96FF9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 AC243960.2-201ENST00000600996 747 ntBASIC19.05■□□□□ 0.64
CDCA5Q96FF9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.05■□□□□ 0.64
CDCA5Q96FF9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.05■□□□□ 0.64
CDCA5Q96FF9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 AL031731.1-201ENST00000642131 2094 ntBASIC19.04■□□□□ 0.64
CDCA5Q96FF9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 MIR1247-201ENST00000408206 136 ntBASIC19.04■□□□□ 0.64
CDCA5Q96FF9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 AP001889.1-201ENST00000525414 633 ntBASIC19.04■□□□□ 0.64
CDCA5Q96FF9 AC068587.3-201ENST00000526613 355 ntBASIC19.04■□□□□ 0.64
CDCA5Q96FF9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA5Q96FF9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 ZNF767P-206ENST00000513792 565 ntBASIC19.03■□□□□ 0.64
CDCA5Q96FF9 AP000812.2-201ENST00000538934 718 ntBASIC19.03■□□□□ 0.64
CDCA5Q96FF9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA5Q96FF9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms