Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.31□□□□□ -0.44
RNF183Q96D59 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.31□□□□□ -0.44
RNF183Q96D59 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.31□□□□□ -0.44
RNF183Q96D59 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.31□□□□□ -0.44
RNF183Q96D59 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.31□□□□□ -0.44
RNF183Q96D59 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.31□□□□□ -0.44
RNF183Q96D59 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
RNF183Q96D59 AP002472.1-201ENST00000577490 586 ntBASIC12.31□□□□□ -0.44
RNF183Q96D59 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RNF183Q96D59 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RNF183Q96D59 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF183Q96D59 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
RNF183Q96D59 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 PCDHB19P-201ENST00000570871 2371 ntBASIC12.31□□□□□ -0.44
RNF183Q96D59 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF183Q96D59 AC116353.5-201ENST00000638148 1699 ntBASIC12.31□□□□□ -0.44
RNF183Q96D59 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RNF183Q96D59 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF183Q96D59 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RNF183Q96D59 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.3□□□□□ -0.44
RNF183Q96D59 LINC02199-201ENST00000506655 2702 ntBASIC12.3□□□□□ -0.44
RNF183Q96D59 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 AL353732.1-201ENST00000569618 1459 ntBASIC12.3□□□□□ -0.44
RNF183Q96D59 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
RNF183Q96D59 CNN2P11-201ENST00000429351 262 ntBASIC12.3□□□□□ -0.44
RNF183Q96D59 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.3□□□□□ -0.44
RNF183Q96D59 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.3□□□□□ -0.44
RNF183Q96D59 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
RNF183Q96D59 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 AC092902.6-201ENST00000641783 218 ntBASIC12.3□□□□□ -0.44
RNF183Q96D59 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RNF183Q96D59 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms