Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 CNN2P11-201ENST00000429351 262 ntBASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 MIR4492-201ENST00000581627 80 ntBASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 AL353732.1-201ENST00000569618 1459 ntBASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 AC012569.1-201ENST00000591191 1524 ntBASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP4CQ96CF2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 KRT8P39-201ENST00000396270 1433 ntBASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 METTL21AP1-201ENST00000438852 635 ntBASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 TIMM8BP1-201ENST00000452384 211 ntBASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 AC005412.3-201ENST00000580309 715 ntBASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 MIR4515-201ENST00000584082 81 ntBASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHMP4CQ96CF2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 CYP2T1P-202ENST00000641596 2535 ntBASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 HCG4-201ENST00000418983 998 ntBASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 AL671710.1-201ENST00000610245 2349 ntBASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP4CQ96CF2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP4CQ96CF2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms