Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 RN7SL510P-201ENST00000581311 263 ntBASIC14.88□□□□□ -0.03
PTP4A1Q93096 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 AC006504.4-201ENST00000592118 1568 ntBASIC14.88□□□□□ -0.03
PTP4A1Q93096 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
PTP4A1Q93096 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTP4A1Q93096 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 FAAHP1-202ENST00000446499 1238 ntBASIC14.87□□□□□ -0.03
PTP4A1Q93096 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 AL121912.1-201ENST00000603683 238 ntBASIC14.87□□□□□ -0.03
PTP4A1Q93096 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 AC092384.3-202ENST00000564646 2873 ntBASIC14.87□□□□□ -0.03
PTP4A1Q93096 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 AL353732.1-201ENST00000569618 1459 ntBASIC14.87□□□□□ -0.03
PTP4A1Q93096 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTP4A1Q93096 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PTP4A1Q93096 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.86□□□□□ -0.03
PTP4A1Q93096 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTP4A1Q93096 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms