Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHC3Q92529 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SHC3Q92529 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.58■□□□□ 0.41
SHC3Q92529 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.58■□□□□ 0.41
SHC3Q92529 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHC3Q92529 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.58■□□□□ 0.41
SHC3Q92529 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.58■□□□□ 0.41
SHC3Q92529 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.58■□□□□ 0.4
SHC3Q92529 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SHC3Q92529 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC3Q92529 AC002056.1-201ENST00000395613 760 ntBASIC17.58■□□□□ 0.4
SHC3Q92529 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHC3Q92529 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.58■□□□□ 0.4
SHC3Q92529 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SHC3Q92529 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SHC3Q92529 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.58■□□□□ 0.4
SHC3Q92529 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC3Q92529 AC073439.1-201ENST00000624121 1774 ntBASIC17.58■□□□□ 0.4
SHC3Q92529 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.58■□□□□ 0.4
SHC3Q92529 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.58■□□□□ 0.4
SHC3Q92529 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.58■□□□□ 0.4
SHC3Q92529 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC3Q92529 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC3Q92529 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.57■□□□□ 0.4
SHC3Q92529 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SHC3Q92529 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.57■□□□□ 0.4
SHC3Q92529 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.57■□□□□ 0.4
SHC3Q92529 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.57■□□□□ 0.4
SHC3Q92529 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SHC3Q92529 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.57■□□□□ 0.4
SHC3Q92529 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.57■□□□□ 0.4
SHC3Q92529 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC3Q92529 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.57■□□□□ 0.4
SHC3Q92529 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SHC3Q92529 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.56■□□□□ 0.4
SHC3Q92529 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.56■□□□□ 0.4
SHC3Q92529 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHC3Q92529 MIR574-201ENST00000385209 96 ntBASIC17.56■□□□□ 0.4
SHC3Q92529 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 PGAM5P1-201ENST00000518923 814 ntBASIC17.56■□□□□ 0.4
SHC3Q92529 AC112191.1-201ENST00000523689 701 ntBASIC17.56■□□□□ 0.4
SHC3Q92529 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC3Q92529 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC3Q92529 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC3Q92529 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC3Q92529 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.55■□□□□ 0.4
SHC3Q92529 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC3Q92529 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SHC3Q92529 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SHC3Q92529 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC3Q92529 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC3Q92529 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC3Q92529 AL022342.1-201ENST00000400363 863 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms