Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 RNPS1P1-201ENST00000507437 918 ntBASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 AC079776.4-201ENST00000511039 504 ntBASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 AP001005.1-201ENST00000571755 1248 ntBASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 AP000867.4-201ENST00000641616 219 ntBASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 HLA-A-201ENST00000376802 1334 ntBASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40AQ8WXH6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 AC022532.1-201ENST00000624563 1728 ntBASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40AQ8WXH6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 AL353593.2-201ENST00000602529 1483 ntBASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 AC099063.4-201ENST00000641099 1602 ntBASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 AC023824.1-201ENST00000562945 2975 ntBASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40AQ8WXH6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms