Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AC079140.1-201ENST00000508039 487 ntBASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 AC021097.1-201ENST00000607902 574 ntBASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 KRT18P28-201ENST00000453838 1332 ntBASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AC105020.1-201ENST00000435356 2205 ntBASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AC016027.1-202ENST00000607927 1699 ntBASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 METTL21AP1-201ENST00000438852 635 ntBASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AC243562.1-201ENST00000560672 389 ntBASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FNDC9Q8TBE3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AL139384.1-201ENST00000612143 3047 ntBASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AC005237.2-201ENST00000434368 219 ntBASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AL592309.1-201ENST00000443127 649 ntBASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.87□□□□□ -0.03
FNDC9Q8TBE3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms