Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AC023274.1-201ENST00000418278 595 ntBASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 UPF3AP3-201ENST00000420996 769 ntBASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 GPX1P2-201ENST00000429271 606 ntBASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AC002347.1-201ENST00000569543 541 ntBASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AC092865.6-201ENST00000642101 219 ntBASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH19Q8TAB3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 PDPK2P-202ENST00000562415 1191 ntBASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 AC008741.2-201ENST00000612792 3115 ntBASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH19Q8TAB3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 DNAJB3-201ENST00000446806 729 ntBASIC17.02■□□□□ 0.32
PCDH19Q8TAB3 AC074386.1-202ENST00000463561 864 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms