Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 SERBP1P3-201ENST00000459980 809 ntBASIC20.18■□□□□ 0.82
RTL9Q8NET4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 AC026471.1-201ENST00000564629 3026 ntBASIC20.17■□□□□ 0.82
RTL9Q8NET4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.17■□□□□ 0.82
RTL9Q8NET4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL9Q8NET4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
RTL9Q8NET4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.16■□□□□ 0.82
RTL9Q8NET4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 AC114501.2-201ENST00000439631 535 ntBASIC20.16■□□□□ 0.82
RTL9Q8NET4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 MIR4321-201ENST00000592276 80 ntBASIC20.16■□□□□ 0.82
RTL9Q8NET4 AL359881.2-201ENST00000602973 570 ntBASIC20.16■□□□□ 0.82
RTL9Q8NET4 AL365330.1-201ENST00000607459 531 ntBASIC20.16■□□□□ 0.82
RTL9Q8NET4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.16■□□□□ 0.82
RTL9Q8NET4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL9Q8NET4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 CU639417.3-201ENST00000624240 1404 ntBASIC20.15■□□□□ 0.82
RTL9Q8NET4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 API5-211ENST00000534695 560 ntTSL 5 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL9Q8NET4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RTL9Q8NET4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms