Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC004817.3-201ENST00000602957 2129 ntBASIC14.62□□□□□ -0.07
DNAAF1Q8NEP3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DNAAF1Q8NEP3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNAAF1Q8NEP3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNAAF1Q8NEP3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 AP005117.1-201ENST00000584346 1413 ntBASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.61□□□□□ -0.07
DNAAF1Q8NEP3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 AC126177.1-201ENST00000547829 2218 ntBASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 NUS1P2-201ENST00000417358 873 ntBASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 AC092119.3-201ENST00000612618 583 ntBASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DNAAF1Q8NEP3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
DNAAF1Q8NEP3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DNAAF1Q8NEP3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DNAAF1Q8NEP3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms