Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 AC091046.1-201ENST00000331871 207 ntBASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 MIR326-201ENST00000362220 95 ntBASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 MIR7845-201ENST00000618396 99 ntBASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 AL355864.2-201ENST00000447420 863 ntBASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 AL662890.1-201ENST00000396818 632 ntBASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 AL355334.1-201ENST00000417713 215 ntBASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 EIF4HP1-201ENST00000453115 687 ntBASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCDC168Q8NDH2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC168Q8NDH2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC168Q8NDH2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC168Q8NDH2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC168Q8NDH2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms