Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 AC073389.1-201ENST00000595595 795 ntBASIC16.91■□□□□ 0.3
RTL3Q8N8U3 AC022145.2-201ENST00000598203 171 ntBASIC16.91■□□□□ 0.3
RTL3Q8N8U3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 AC055717.3-201ENST00000622967 595 ntBASIC16.91■□□□□ 0.3
RTL3Q8N8U3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL3Q8N8U3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 AC005622.1-201ENST00000636801 1703 ntBASIC16.9■□□□□ 0.3
RTL3Q8N8U3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 AC105233.2-201ENST00000523697 349 ntBASIC16.9■□□□□ 0.3
RTL3Q8N8U3 AF228730.5-201ENST00000530288 346 ntBASIC16.9■□□□□ 0.3
RTL3Q8N8U3 LINC01225-203ENST00000563550 1244 ntBASIC16.9■□□□□ 0.3
RTL3Q8N8U3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 AC027307.2-201ENST00000591252 911 ntBASIC16.9■□□□□ 0.3
RTL3Q8N8U3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL3Q8N8U3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RTL3Q8N8U3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RTL3Q8N8U3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RTL3Q8N8U3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RTL3Q8N8U3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RTL3Q8N8U3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RTL3Q8N8U3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AP006288.1-201ENST00000446065 395 ntBASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AC004967.1-201ENST00000453589 447 ntBASIC16.89■□□□□ 0.29
RTL3Q8N8U3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AP000344.2-201ENST00000512987 629 ntBASIC16.89■□□□□ 0.29
RTL3Q8N8U3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 KRT8P23-201ENST00000560090 1207 ntBASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 AC134684.3-201ENST00000641758 218 ntBASIC16.89■□□□□ 0.29
RTL3Q8N8U3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL3Q8N8U3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms