Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 OR7E47P-204ENST00000575924 449 ntBASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 AC092364.2-202ENST00000597012 1073 ntBASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 AC013467.2-201ENST00000605472 835 ntBASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FBXO39Q8N4B4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 CYP2T1P-202ENST00000641596 2535 ntBASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 MIR770-201ENST00000390219 98 ntBASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 AP000344.2-201ENST00000512987 629 ntBASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FBXO39Q8N4B4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 TSEN15P1-201ENST00000423257 515 ntBASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 AC027612.4-201ENST00000605371 583 ntBASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 AC091812.2-201ENST00000619081 385 ntBASIC16.52■□□□□ 0.24
FBXO39Q8N4B4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms