Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AJ011932.1-201ENST00000621707 465 ntBASIC18.27■□□□□ 0.52
CCDC60Q8IWA6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC60Q8IWA6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC60Q8IWA6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC60Q8IWA6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC60Q8IWA6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CCDC60Q8IWA6 AD000864.1-201ENST00000624076 2295 ntBASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 INGX-202ENST00000489074 768 ntBASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 AC105021.1-202ENST00000570572 669 ntBASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC60Q8IWA6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 AC005052.1-201ENST00000625181 2492 ntBASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 AC027369.6-201ENST00000525520 931 ntBASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 RN7SL828P-201ENST00000607615 303 ntBASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 AL035456.1-201ENST00000456064 1369 ntBASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC60Q8IWA6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 AC100757.3-201ENST00000622361 1406 ntBASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC60Q8IWA6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms