Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 HYMAI-201ENST00000635591 3347 ntBASIC15.84■□□□□ 0.13
RAB43Q86YS6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 ADH5P3-201ENST00000433842 1137 ntBASIC15.84■□□□□ 0.13
RAB43Q86YS6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 AC011467.4-201ENST00000594891 528 ntBASIC15.84■□□□□ 0.13
RAB43Q86YS6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 AL355312.1-201ENST00000407115 2176 ntBASIC15.84■□□□□ 0.13
RAB43Q86YS6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 CROCCP2-202ENST00000412962 2773 ntBASIC15.84■□□□□ 0.13
RAB43Q86YS6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB43Q86YS6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB43Q86YS6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RAB43Q86YS6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
RAB43Q86YS6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB43Q86YS6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RAB43Q86YS6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB43Q86YS6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.83■□□□□ 0.13
RAB43Q86YS6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 AC005237.2-201ENST00000434368 219 ntBASIC15.83■□□□□ 0.12
RAB43Q86YS6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 AGGF1P2-201ENST00000426656 2106 ntBASIC15.83■□□□□ 0.12
RAB43Q86YS6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 AC012569.1-201ENST00000591191 1524 ntBASIC15.83■□□□□ 0.12
RAB43Q86YS6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB43Q86YS6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB43Q86YS6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB43Q86YS6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB43Q86YS6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB43Q86YS6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB43Q86YS6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB43Q86YS6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB43Q86YS6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB43Q86YS6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB43Q86YS6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 AL139400.1-201ENST00000366220 510 ntBASIC15.82■□□□□ 0.12
RAB43Q86YS6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 MIR770-201ENST00000390219 98 ntBASIC15.82■□□□□ 0.12
RAB43Q86YS6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB43Q86YS6 HLA-J-203ENST00000494367 1087 ntBASIC15.82■□□□□ 0.12
RAB43Q86YS6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms