Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AC093724.1-201ENST00000448659 1027 ntBASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 GPS2P2-201ENST00000430745 888 ntBASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 AC109322.1-201ENST00000524499 1264 ntBASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 ALG1L8P-201ENST00000533887 760 ntBASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 AC025678.2-201ENST00000562061 970 ntBASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM4Q86VH4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 NKILA-202ENST00000614771 2598 ntBASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 SPTSSB-204ENST00000617024 1292 ntBASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 AP001059.3-201ENST00000619053 235 ntBASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 AC093028.1-201ENST00000622998 982 ntBASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM4Q86VH4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 FOXO1B-201ENST00000504678 1527 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms