Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 CTBP2P3-201ENST00000585629 1255 ntBASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 AP001350.2-201ENST00000625104 1094 ntBASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OTOP1Q7RTM1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 AC131009.4-201ENST00000624048 1740 ntBASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 HTR7P1-202ENST00000624664 4411 ntBASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 RN7SL618P-201ENST00000477850 296 ntBASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 ELK1P1-201ENST00000485699 580 ntBASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 RN7SL219P-201ENST00000582872 296 ntBASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.97■□□□□ 0.63
OTOP1Q7RTM1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 AC080080.1-201ENST00000625121 2420 ntBASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 FAM220BP-201ENST00000377689 816 ntBASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 MIR1908-201ENST00000410394 80 ntBASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 AC007389.4-201ENST00000454674 793 ntBASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 CROCCP4-201ENST00000457096 498 ntBASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 AC104989.1-201ENST00000519711 778 ntBASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 AL512361.1-201ENST00000554200 418 ntBASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 AC044860.1-202ENST00000559481 777 ntBASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
OTOP1Q7RTM1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.95■□□□□ 0.62
OTOP1Q7RTM1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms