Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SIGLEC30P-201ENST00000455569 941 ntBASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 IFNL4P1-201ENST00000607083 540 ntBASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 AP005117.1-201ENST00000584346 1413 ntBASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 CICP20-201ENST00000443330 2801 ntBASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM53Q6P2H8 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 AC132938.5-201ENST00000624980 1813 ntBASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 SAPCD2P3-201ENST00000455031 850 ntBASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 AC106795.1-205ENST00000512851 1056 ntBASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 MTDHP3-201ENST00000594186 672 ntBASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 AP001269.4-201ENST00000609611 512 ntBASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM53Q6P2H8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TMEM53Q6P2H8 AC005252.3-201ENST00000623855 2258 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms