Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 ACA64.2-201ENST00000459014 129 ntBASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 AC106886.1-201ENST00000568660 600 ntBASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 CTBP2P3-201ENST00000585629 1255 ntBASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 AC007613.1-201ENST00000572811 2597 ntBASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM71Q2Q1W2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 AL139010.1-201ENST00000454878 894 ntBASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 RN7SL837P-201ENST00000463010 287 ntBASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ELK1P1-201ENST00000485699 580 ntBASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 TPRX2P-201ENST00000535362 881 ntBASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM71Q2Q1W2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 AC112492.5-201ENST00000421897 457 ntBASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 HIST3H2BA-201ENST00000436555 524 ntBASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 AC011495.1-201ENST00000498085 584 ntBASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 AC092337.1-201ENST00000568699 1129 ntBASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms