Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 PCDHB19P-201ENST00000570871 2371 ntBASIC19.84■□□□□ 0.77
RFX7Q2KHR2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 U82695.1-201ENST00000635752 1889 ntBASIC19.84■□□□□ 0.77
RFX7Q2KHR2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 AC006449.6-201ENST00000612330 2296 ntBASIC19.84■□□□□ 0.77
RFX7Q2KHR2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 BASP1P1-201ENST00000430708 665 ntBASIC19.83■□□□□ 0.77
RFX7Q2KHR2 AC245100.5-201ENST00000452108 331 ntBASIC19.83■□□□□ 0.77
RFX7Q2KHR2 AC138761.1-201ENST00000584393 385 ntBASIC19.83■□□□□ 0.77
RFX7Q2KHR2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 REXO1L8P-201ENST00000604378 1897 ntBASIC19.83■□□□□ 0.77
RFX7Q2KHR2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.83■□□□□ 0.77
RFX7Q2KHR2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 AC002472.2-201ENST00000442739 958 ntBASIC19.83■□□□□ 0.76
RFX7Q2KHR2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 RARRES2P9-201ENST00000565168 469 ntBASIC19.83■□□□□ 0.76
RFX7Q2KHR2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RFX7Q2KHR2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 AC236430.1-201ENST00000402231 743 ntBASIC19.82■□□□□ 0.76
RFX7Q2KHR2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 AC069120.2-201ENST00000524091 540 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms