Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 AP001269.4-201ENST00000609611 512 ntBASIC12.73□□□□□ -0.37
HIST1H1AQ02539 AL732292.2-201ENST00000609649 430 ntBASIC12.73□□□□□ -0.37
HIST1H1AQ02539 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 AP005117.1-201ENST00000584346 1413 ntBASIC12.72□□□□□ -0.37
HIST1H1AQ02539 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 HCG4P8-203ENST00000443049 980 ntBASIC12.72□□□□□ -0.37
HIST1H1AQ02539 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 MIR3652-201ENST00000579335 131 ntBASIC12.72□□□□□ -0.37
HIST1H1AQ02539 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 AC073592.4-201ENST00000623827 446 ntBASIC12.72□□□□□ -0.37
HIST1H1AQ02539 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
HIST1H1AQ02539 AC092384.3-202ENST00000564646 2873 ntBASIC12.71□□□□□ -0.37
HIST1H1AQ02539 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H1AQ02539 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms