Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC087481.3-201ENST00000602886 1894 ntBASIC17.29■□□□□ 0.36
CBX1P83916 REXO1L8P-201ENST00000604378 1897 ntBASIC17.29■□□□□ 0.36
CBX1P83916 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CBX1P83916 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX1P83916 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX1P83916 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CBX1P83916 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX1P83916 MIR935-201ENST00000401179 91 ntBASIC17.29■□□□□ 0.36
CBX1P83916 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CBX1P83916 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX1P83916 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX1P83916 AC091874.3-201ENST00000512672 1195 ntBASIC17.29■□□□□ 0.36
CBX1P83916 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 AL050303.2-201ENST00000619798 666 ntBASIC17.29■□□□□ 0.36
CBX1P83916 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.29■□□□□ 0.36
CBX1P83916 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX1P83916 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX1P83916 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CBX1P83916 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CBX1P83916 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX1P83916 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 REXO1L1P-202ENST00000608646 1974 ntBASIC17.28■□□□□ 0.36
CBX1P83916 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CBX1P83916 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 MBLAC2-202ENST00000514906 1936 ntBASIC17.28■□□□□ 0.36
CBX1P83916 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.28■□□□□ 0.36
CBX1P83916 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 HLA-B-256ENST00000639848 1089 ntBASIC17.28■□□□□ 0.36
CBX1P83916 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.28■□□□□ 0.36
CBX1P83916 AC087386.2-201ENST00000623212 4637 ntBASIC17.28■□□□□ 0.36
CBX1P83916 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CBX1P83916 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CBX1P83916 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CBX1P83916 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.28■□□□□ 0.36
CBX1P83916 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX1P83916 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.27■□□□□ 0.36
CBX1P83916 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CBX1P83916 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.27■□□□□ 0.36
CBX1P83916 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX1P83916 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CBX1P83916 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX1P83916 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.27■□□□□ 0.36
CBX1P83916 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX1P83916 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CBX1P83916 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX1P83916 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX1P83916 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX1P83916 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.27■□□□□ 0.36
CBX1P83916 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX1P83916 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX1P83916 PNMA6B-201ENST00000538162 1200 ntBASIC17.27■□□□□ 0.36
CBX1P83916 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.27■□□□□ 0.36
CBX1P83916 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CBX1P83916 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.27■□□□□ 0.36
CBX1P83916 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.27■□□□□ 0.36
CBX1P83916 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms