Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA3P83110 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HTRA3P83110 AL136982.4-201ENST00000437689 1740 ntBASIC18.8■□□□□ 0.6
HTRA3P83110 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA3P83110 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
HTRA3P83110 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HTRA3P83110 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.79■□□□□ 0.6
HTRA3P83110 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HTRA3P83110 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HTRA3P83110 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA3P83110 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 POM121L10P-201ENST00000436994 1285 ntBASIC18.79■□□□□ 0.6
HTRA3P83110 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.79■□□□□ 0.6
HTRA3P83110 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA3P83110 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.79■□□□□ 0.6
HTRA3P83110 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA3P83110 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.79■□□□□ 0.6
HTRA3P83110 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.79■□□□□ 0.6
HTRA3P83110 AP001065.2-201ENST00000617205 644 ntBASIC18.79■□□□□ 0.6
HTRA3P83110 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
HTRA3P83110 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA3P83110 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.79■□□□□ 0.6
HTRA3P83110 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.79■□□□□ 0.6
HTRA3P83110 AL021920.2-201ENST00000624828 1351 ntBASIC18.79■□□□□ 0.6
HTRA3P83110 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA3P83110 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.78■□□□□ 0.6
HTRA3P83110 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.78■□□□□ 0.6
HTRA3P83110 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 AL512430.1-201ENST00000392575 860 ntBASIC18.78■□□□□ 0.6
HTRA3P83110 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HTRA3P83110 FO393414.2-201ENST00000405153 598 ntBASIC18.78■□□□□ 0.6
HTRA3P83110 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.78■□□□□ 0.6
HTRA3P83110 AC007274.2-201ENST00000421675 662 ntBASIC18.78■□□□□ 0.6
HTRA3P83110 AC097065.1-201ENST00000425737 517 ntBASIC18.78■□□□□ 0.6
HTRA3P83110 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 RPL13P2-201ENST00000440687 659 ntBASIC18.78■□□□□ 0.6
HTRA3P83110 AC098935.1-201ENST00000446057 611 ntBASIC18.78■□□□□ 0.6
HTRA3P83110 RN7SL8P-201ENST00000461771 266 ntBASIC18.78■□□□□ 0.6
HTRA3P83110 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
HTRA3P83110 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.78■□□□□ 0.6
HTRA3P83110 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HTRA3P83110 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.78■□□□□ 0.6
HTRA3P83110 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HTRA3P83110 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA3P83110 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.78■□□□□ 0.6
HTRA3P83110 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.77■□□□□ 0.6
HTRA3P83110 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.77■□□□□ 0.6
HTRA3P83110 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HTRA3P83110 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HTRA3P83110 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.77■□□□□ 0.6
HTRA3P83110 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 ACTG1P2-201ENST00000415776 1125 ntBASIC18.77■□□□□ 0.6
HTRA3P83110 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 ACTG1P11-201ENST00000425411 1125 ntBASIC18.77■□□□□ 0.6
HTRA3P83110 RN7SL181P-201ENST00000462921 277 ntBASIC18.77■□□□□ 0.6
HTRA3P83110 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
HTRA3P83110 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HTRA3P83110 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HTRA3P83110 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HTRA3P83110 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.77■□□□□ 0.6
HTRA3P83110 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA3P83110 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.77■□□□□ 0.6
HTRA3P83110 AC091544.8-201ENST00000619490 361 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms