Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.59■□□□□ 0.25
AP1S1P61966 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.59■□□□□ 0.25
AP1S1P61966 AC098859.1-201ENST00000502915 1238 ntBASIC16.59■□□□□ 0.25
AP1S1P61966 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 SLC25A39P2-201ENST00000537614 270 ntBASIC16.59■□□□□ 0.25
AP1S1P61966 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.59■□□□□ 0.25
AP1S1P61966 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.59■□□□□ 0.25
AP1S1P61966 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.59■□□□□ 0.25
AP1S1P61966 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
AP1S1P61966 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.59■□□□□ 0.25
AP1S1P61966 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.59■□□□□ 0.25
AP1S1P61966 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
AP1S1P61966 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
AP1S1P61966 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 PCDHA14-201ENST00000506751 2298 ntBASIC16.58■□□□□ 0.25
AP1S1P61966 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
AP1S1P61966 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
AP1S1P61966 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S1P61966 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.58■□□□□ 0.25
AP1S1P61966 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S1P61966 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.58■□□□□ 0.24
AP1S1P61966 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S1P61966 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.58■□□□□ 0.24
AP1S1P61966 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S1P61966 SPTSSB-204ENST00000617024 1292 ntBASIC16.58■□□□□ 0.24
AP1S1P61966 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AP1S1P61966 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S1P61966 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S1P61966 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S1P61966 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
AP1S1P61966 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AP1S1P61966 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S1P61966 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AP1S1P61966 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S1P61966 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
AP1S1P61966 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.57■□□□□ 0.24
AP1S1P61966 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S1P61966 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S1P61966 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
AP1S1P61966 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S1P61966 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S1P61966 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP1S1P61966 FOXO1B-201ENST00000504678 1527 ntBASIC16.57■□□□□ 0.24
AP1S1P61966 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
AP1S1P61966 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S1P61966 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP1S1P61966 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.57■□□□□ 0.24
AP1S1P61966 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.57■□□□□ 0.24
AP1S1P61966 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S1P61966 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.57■□□□□ 0.24
AP1S1P61966 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.57■□□□□ 0.24
AP1S1P61966 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms