Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN20P56880 AC005412.3-201ENST00000580309 715 ntBASIC15.19■□□□□ 0.02
CLDN20P56880 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN20P56880 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN20P56880 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 SLC22A20-204ENST00000530038 1673 ntBASIC15.19■□□□□ 0.02
CLDN20P56880 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLDN20P56880 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN20P56880 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.18■□□□□ 0.02
CLDN20P56880 MCCD1P2-201ENST00000423228 335 ntBASIC15.18■□□□□ 0.02
CLDN20P56880 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN20P56880 AC074386.1-202ENST00000463561 864 ntBASIC15.18■□□□□ 0.02
CLDN20P56880 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.18■□□□□ 0.02
CLDN20P56880 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN20P56880 MTDHP5-201ENST00000598980 586 ntBASIC15.18■□□□□ 0.02
CLDN20P56880 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN20P56880 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN20P56880 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.18■□□□□ 0.02
CLDN20P56880 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN20P56880 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN20P56880 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 PAUPAR-201ENST00000630360 2965 ntBASIC15.18■□□□□ 0.02
CLDN20P56880 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN20P56880 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CLDN20P56880 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLDN20P56880 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 AL353732.1-201ENST00000569618 1459 ntBASIC15.17■□□□□ 0.02
CLDN20P56880 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN20P56880 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 GPX1P2-201ENST00000429271 606 ntBASIC15.17■□□□□ 0.02
CLDN20P56880 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN20P56880 DNAJB3-201ENST00000446806 729 ntBASIC15.17■□□□□ 0.02
CLDN20P56880 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN20P56880 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN20P56880 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN20P56880 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN20P56880 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN20P56880 MIR4515-201ENST00000584082 81 ntBASIC15.17■□□□□ 0.02
CLDN20P56880 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN20P56880 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN20P56880 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLDN20P56880 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 AC092919.2-201ENST00000623631 1645 ntBASIC15.17■□□□□ 0.02
CLDN20P56880 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN20P56880 TUBB8P12-201ENST00000308911 1335 ntBASIC15.17■□□□□ 0.02
CLDN20P56880 TUBB7P-202ENST00000428444 1305 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms