Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
WNT3AP56704 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
WNT3AP56704 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.69■□□□□ 0.26
WNT3AP56704 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
WNT3AP56704 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
WNT3AP56704 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.69■□□□□ 0.26
WNT3AP56704 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.68■□□□□ 0.26
WNT3AP56704 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
WNT3AP56704 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.68■□□□□ 0.26
WNT3AP56704 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 KRT18P34-201ENST00000488218 1270 ntBASIC16.68■□□□□ 0.26
WNT3AP56704 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
WNT3AP56704 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
WNT3AP56704 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.68■□□□□ 0.26
WNT3AP56704 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
WNT3AP56704 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
WNT3AP56704 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.67■□□□□ 0.26
WNT3AP56704 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 AC112191.1-201ENST00000523689 701 ntBASIC16.67■□□□□ 0.26
WNT3AP56704 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
WNT3AP56704 AC002347.1-201ENST00000569543 541 ntBASIC16.67■□□□□ 0.26
WNT3AP56704 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.67■□□□□ 0.26
WNT3AP56704 AL161645.1-201ENST00000622716 1255 ntBASIC16.67■□□□□ 0.26
WNT3AP56704 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
WNT3AP56704 REXO1L8P-201ENST00000604378 1897 ntBASIC16.67■□□□□ 0.26
WNT3AP56704 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
WNT3AP56704 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
WNT3AP56704 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
WNT3AP56704 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.66■□□□□ 0.26
WNT3AP56704 WASH6P-202ENST00000359512 1437 ntBASIC16.66■□□□□ 0.26
WNT3AP56704 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.66■□□□□ 0.26
WNT3AP56704 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.66■□□□□ 0.26
WNT3AP56704 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms