Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDE1AP54750 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.12■□□□□ 0.81
PDE1AP54750 AC112191.1-201ENST00000523689 701 ntBASIC20.12■□□□□ 0.81
PDE1AP54750 AC040169.1-201ENST00000565382 521 ntBASIC20.12■□□□□ 0.81
PDE1AP54750 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 AC091812.2-201ENST00000619081 385 ntBASIC20.12■□□□□ 0.81
PDE1AP54750 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.12■□□□□ 0.81
PDE1AP54750 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
PDE1AP54750 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDE1AP54750 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
PDE1AP54750 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDE1AP54750 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.12■□□□□ 0.81
PDE1AP54750 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
PDE1AP54750 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDE1AP54750 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDE1AP54750 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.11■□□□□ 0.81
PDE1AP54750 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.11■□□□□ 0.81
PDE1AP54750 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
PDE1AP54750 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.11■□□□□ 0.81
PDE1AP54750 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.11■□□□□ 0.81
PDE1AP54750 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PDE1AP54750 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.11■□□□□ 0.81
PDE1AP54750 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.11■□□□□ 0.81
PDE1AP54750 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 AC092902.6-201ENST00000641783 218 ntBASIC20.11■□□□□ 0.81
PDE1AP54750 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.11■□□□□ 0.81
PDE1AP54750 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.11■□□□□ 0.81
PDE1AP54750 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
PDE1AP54750 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.11■□□□□ 0.81
PDE1AP54750 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDE1AP54750 U82695.1-201ENST00000635752 1889 ntBASIC20.11■□□□□ 0.81
PDE1AP54750 AC008741.2-201ENST00000612792 3115 ntBASIC20.11■□□□□ 0.81
PDE1AP54750 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.11■□□□□ 0.81
PDE1AP54750 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PDE1AP54750 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
PDE1AP54750 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PDE1AP54750 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE1AP54750 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PDE1AP54750 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 MCCD1P2-201ENST00000423228 335 ntBASIC20.1■□□□□ 0.81
PDE1AP54750 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.1■□□□□ 0.81
PDE1AP54750 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.1■□□□□ 0.81
PDE1AP54750 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDE1AP54750 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 AL365203.3-201ENST00000609742 2057 ntBASIC20.1■□□□□ 0.81
PDE1AP54750 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.1■□□□□ 0.81
PDE1AP54750 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE1AP54750 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.1■□□□□ 0.81
PDE1AP54750 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.1■□□□□ 0.81
PDE1AP54750 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.1■□□□□ 0.81
PDE1AP54750 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.1■□□□□ 0.81
PDE1AP54750 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDE1AP54750 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDE1AP54750 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDE1AP54750 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE1AP54750 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE1AP54750 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDE1AP54750 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDE1AP54750 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE1AP54750 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.09■□□□□ 0.81
PDE1AP54750 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE1AP54750 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE1AP54750 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDE1AP54750 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms