Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.67■□□□□ 0.42
RAD23BP54727 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD23BP54727 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RAD23BP54727 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RAD23BP54727 AC016027.1-202ENST00000607927 1699 ntBASIC17.67■□□□□ 0.42
RAD23BP54727 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RAD23BP54727 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD23BP54727 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RAD23BP54727 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD23BP54727 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD23BP54727 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.67■□□□□ 0.42
RAD23BP54727 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAD23BP54727 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RAD23BP54727 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAD23BP54727 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 HTR5BP-201ENST00000430851 1154 ntBASIC17.66■□□□□ 0.42
RAD23BP54727 DNAJB3-201ENST00000446806 729 ntBASIC17.66■□□□□ 0.42
RAD23BP54727 AC112482.1-201ENST00000492080 688 ntBASIC17.66■□□□□ 0.42
RAD23BP54727 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.66■□□□□ 0.42
RAD23BP54727 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.66■□□□□ 0.42
RAD23BP54727 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.66■□□□□ 0.42
RAD23BP54727 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 AC010327.4-202ENST00000591484 748 ntBASIC17.66■□□□□ 0.42
RAD23BP54727 AL161645.1-201ENST00000622716 1255 ntBASIC17.66■□□□□ 0.42
RAD23BP54727 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.66■□□□□ 0.42
RAD23BP54727 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.66■□□□□ 0.42
RAD23BP54727 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RAD23BP54727 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAD23BP54727 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.66■□□□□ 0.42
RAD23BP54727 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.65■□□□□ 0.42
RAD23BP54727 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 AC005052.1-201ENST00000625181 2492 ntBASIC17.65■□□□□ 0.42
RAD23BP54727 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 AC068418.2-201ENST00000577309 3703 ntBASIC17.65■□□□□ 0.42
RAD23BP54727 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 RPSAP43-201ENST00000402237 625 ntBASIC17.65■□□□□ 0.42
RAD23BP54727 GPX1P2-201ENST00000429271 606 ntBASIC17.65■□□□□ 0.42
RAD23BP54727 ADH5P3-201ENST00000433842 1137 ntBASIC17.65■□□□□ 0.42
RAD23BP54727 MKNK2P1-201ENST00000437526 628 ntBASIC17.65■□□□□ 0.42
RAD23BP54727 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.65■□□□□ 0.42
RAD23BP54727 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.65■□□□□ 0.42
RAD23BP54727 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.65■□□□□ 0.42
RAD23BP54727 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
RAD23BP54727 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.65■□□□□ 0.42
RAD23BP54727 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.65■□□□□ 0.42
RAD23BP54727 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAD23BP54727 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
RAD23BP54727 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAD23BP54727 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
RAD23BP54727 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAD23BP54727 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms