Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 KRT8P22-201ENST00000562317 1415 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NUBP1P53384 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NUBP1P53384 CDC14C-201ENST00000428251 1719 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 REXO1L11P-201ENST00000620964 1927 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.45■□□□□ 0.22
NUBP1P53384 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 AL442647.2-201ENST00000429864 857 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.45■□□□□ 0.22
NUBP1P53384 AP000949.1-201ENST00000438328 629 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 AC013402.3-201ENST00000438566 451 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.45■□□□□ 0.22
NUBP1P53384 AL162385.1-201ENST00000451595 1202 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.45■□□□□ 0.22
NUBP1P53384 AP001528.1-201ENST00000499504 1223 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.45■□□□□ 0.22
NUBP1P53384 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.45■□□□□ 0.22
NUBP1P53384 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.45■□□□□ 0.22
NUBP1P53384 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
NUBP1P53384 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC16.45■□□□□ 0.22
NUBP1P53384 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.45■□□□□ 0.22
NUBP1P53384 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.45■□□□□ 0.22
NUBP1P53384 AC010328.2-201ENST00000597698 1111 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 AC114878.2-201ENST00000604863 1251 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 RPSAP52-203ENST00000622976 1023 ntBASIC16.45■□□□□ 0.22
NUBP1P53384 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.45■□□□□ 0.22
NUBP1P53384 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.45■□□□□ 0.22
NUBP1P53384 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NUBP1P53384 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.44■□□□□ 0.22
NUBP1P53384 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.44■□□□□ 0.22
NUBP1P53384 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NUBP1P53384 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.44■□□□□ 0.22
NUBP1P53384 AL021920.2-201ENST00000624828 1351 ntBASIC16.44■□□□□ 0.22
NUBP1P53384 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC16.44■□□□□ 0.22
NUBP1P53384 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NUBP1P53384 DSTNP1-201ENST00000419906 465 ntBASIC16.44■□□□□ 0.22
NUBP1P53384 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 AL589987.1-201ENST00000453380 819 ntBASIC16.44■□□□□ 0.22
NUBP1P53384 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NUBP1P53384 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.44■□□□□ 0.22
NUBP1P53384 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC16.44■□□□□ 0.22
NUBP1P53384 AP001258.2-201ENST00000529891 490 ntBASIC16.44■□□□□ 0.22
NUBP1P53384 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC16.44■□□□□ 0.22
NUBP1P53384 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC16.44■□□□□ 0.22
NUBP1P53384 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.44■□□□□ 0.22
NUBP1P53384 AC146944.4-201ENST00000602697 718 ntBASIC16.44■□□□□ 0.22
NUBP1P53384 AC074044.1-201ENST00000609673 707 ntBASIC16.44■□□□□ 0.22
NUBP1P53384 AL354696.1-201ENST00000614652 497 ntBASIC16.44■□□□□ 0.22
NUBP1P53384 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NUBP1P53384 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.44■□□□□ 0.22
NUBP1P53384 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC16.44■□□□□ 0.22
NUBP1P53384 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NUBP1P53384 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.44■□□□□ 0.22
NUBP1P53384 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.44■□□□□ 0.22
NUBP1P53384 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NUBP1P53384 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NUBP1P53384 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.44■□□□□ 0.22
NUBP1P53384 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms