Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RN7SL618P-201ENST00000477850 296 ntBASIC14.29□□□□□ -0.12
HCFC1P51610 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HCFC1P51610 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.29□□□□□ -0.12
HCFC1P51610 AC098859.1-201ENST00000502915 1238 ntBASIC14.29□□□□□ -0.12
HCFC1P51610 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.29□□□□□ -0.12
HCFC1P51610 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.29□□□□□ -0.12
HCFC1P51610 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.29□□□□□ -0.12
HCFC1P51610 SRD5A3P1-201ENST00000603021 949 ntBASIC14.29□□□□□ -0.12
HCFC1P51610 AC013467.2-201ENST00000605472 835 ntBASIC14.29□□□□□ -0.12
HCFC1P51610 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.29□□□□□ -0.12
HCFC1P51610 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HCFC1P51610 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HCFC1P51610 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HCFC1P51610 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HCFC1P51610 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.28□□□□□ -0.12
HCFC1P51610 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.28□□□□□ -0.12
HCFC1P51610 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HCFC1P51610 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HCFC1P51610 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.28□□□□□ -0.12
HCFC1P51610 AC114501.2-201ENST00000439631 535 ntBASIC14.28□□□□□ -0.12
HCFC1P51610 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.28□□□□□ -0.12
HCFC1P51610 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HCFC1P51610 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.28□□□□□ -0.12
HCFC1P51610 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.28□□□□□ -0.12
HCFC1P51610 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HCFC1P51610 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.28□□□□□ -0.12
HCFC1P51610 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.28□□□□□ -0.12
HCFC1P51610 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.28□□□□□ -0.12
HCFC1P51610 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.28□□□□□ -0.12
HCFC1P51610 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCFC1P51610 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.27□□□□□ -0.12
HCFC1P51610 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.27□□□□□ -0.12
HCFC1P51610 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.27□□□□□ -0.12
HCFC1P51610 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.27□□□□□ -0.12
HCFC1P51610 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.27□□□□□ -0.12
HCFC1P51610 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.27□□□□□ -0.12
HCFC1P51610 AC023310.3-201ENST00000557027 670 ntBASIC14.27□□□□□ -0.12
HCFC1P51610 AC100756.1-201ENST00000562736 682 ntBASIC14.27□□□□□ -0.12
HCFC1P51610 AC138749.3-201ENST00000567691 622 ntBASIC14.27□□□□□ -0.12
HCFC1P51610 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.27□□□□□ -0.12
HCFC1P51610 AC116165.1-201ENST00000611806 668 ntBASIC14.27□□□□□ -0.12
HCFC1P51610 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HCFC1P51610 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.27□□□□□ -0.13
HCFC1P51610 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.27□□□□□ -0.13
HCFC1P51610 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HCFC1P51610 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HCFC1P51610 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.27□□□□□ -0.13
HCFC1P51610 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.27□□□□□ -0.13
HCFC1P51610 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.27□□□□□ -0.13
HCFC1P51610 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.27□□□□□ -0.13
HCFC1P51610 MPDU1-223ENST00000582151 728 ntBASIC14.27□□□□□ -0.13
HCFC1P51610 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.27□□□□□ -0.13
HCFC1P51610 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.27□□□□□ -0.13
HCFC1P51610 AL033527.4-201ENST00000641026 673 ntBASIC14.27□□□□□ -0.13
HCFC1P51610 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
HCFC1P51610 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HCFC1P51610 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCFC1P51610 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.27□□□□□ -0.13
HCFC1P51610 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.26□□□□□ -0.13
HCFC1P51610 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCFC1P51610 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms