Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC125807.1-201ENST00000483097 614 ntBASIC17.43■□□□□ 0.38
LHX1P48742 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX1P48742 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX1P48742 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX1P48742 AC003101.2-201ENST00000612557 442 ntBASIC17.43■□□□□ 0.38
LHX1P48742 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX1P48742 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
LHX1P48742 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX1P48742 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX1P48742 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
LHX1P48742 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX1P48742 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX1P48742 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LHX1P48742 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX1P48742 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX1P48742 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX1P48742 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
LHX1P48742 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.43■□□□□ 0.38
LHX1P48742 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.42■□□□□ 0.38
LHX1P48742 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX1P48742 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LHX1P48742 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX1P48742 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX1P48742 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 AL353705.2-201ENST00000428243 662 ntBASIC17.42■□□□□ 0.38
LHX1P48742 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX1P48742 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX1P48742 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX1P48742 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX1P48742 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX1P48742 AC140878.1-201ENST00000565277 250 ntBASIC17.42■□□□□ 0.38
LHX1P48742 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX1P48742 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
LHX1P48742 AC007967.4-201ENST00000614700 386 ntBASIC17.42■□□□□ 0.38
LHX1P48742 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX1P48742 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX1P48742 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX1P48742 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
LHX1P48742 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX1P48742 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 AC020916.1-201ENST00000587762 1774 ntBASIC17.41■□□□□ 0.38
LHX1P48742 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LHX1P48742 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX1P48742 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LHX1P48742 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.41■□□□□ 0.38
LHX1P48742 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LHX1P48742 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX1P48742 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.41■□□□□ 0.38
LHX1P48742 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
LHX1P48742 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX1P48742 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX1P48742 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.41■□□□□ 0.38
LHX1P48742 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LHX1P48742 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX1P48742 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX1P48742 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX1P48742 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.4■□□□□ 0.38
LHX1P48742 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX1P48742 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LHX1P48742 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
LHX1P48742 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LHX1P48742 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX1P48742 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LHX1P48742 MIR770-201ENST00000390219 98 ntBASIC17.4■□□□□ 0.38
LHX1P48742 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.4■□□□□ 0.38
LHX1P48742 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.4■□□□□ 0.38
LHX1P48742 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX1P48742 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms