Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL928711.1-201ENST00000570165 459 ntBASIC17.3■□□□□ 0.36
SLC1A1P43005 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A1P43005 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC1A1P43005 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A1P43005 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC1A1P43005 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC1A1P43005 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC1A1P43005 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC1A1P43005 U82695.1-201ENST00000635752 1889 ntBASIC17.29■□□□□ 0.36
SLC1A1P43005 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
SLC1A1P43005 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC1A1P43005 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC1A1P43005 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC1A1P43005 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC1A1P43005 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC1A1P43005 FAAHP1-202ENST00000446499 1238 ntBASIC17.29■□□□□ 0.36
SLC1A1P43005 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC1A1P43005 AC108751.1-201ENST00000490852 363 ntBASIC17.29■□□□□ 0.36
SLC1A1P43005 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC1A1P43005 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.29■□□□□ 0.36
SLC1A1P43005 AL031055.1-201ENST00000606362 631 ntBASIC17.29■□□□□ 0.36
SLC1A1P43005 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC1A1P43005 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SLC1A1P43005 AL773604.1-201ENST00000617417 272 ntBASIC17.29■□□□□ 0.36
SLC1A1P43005 AL691432.3-201ENST00000621860 400 ntBASIC17.29■□□□□ 0.36
SLC1A1P43005 AC105917.1-201ENST00000506637 2539 ntBASIC17.29■□□□□ 0.36
SLC1A1P43005 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLC1A1P43005 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC1A1P43005 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SLC1A1P43005 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A1P43005 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC1A1P43005 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SLC1A1P43005 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SLC1A1P43005 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A1P43005 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 AC004870.1-201ENST00000315132 882 ntBASIC17.28■□□□□ 0.36
SLC1A1P43005 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A1P43005 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A1P43005 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A1P43005 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.28■□□□□ 0.36
SLC1A1P43005 AC092910.1-201ENST00000482027 1129 ntBASIC17.28■□□□□ 0.36
SLC1A1P43005 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A1P43005 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A1P43005 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC1A1P43005 MIR4751-201ENST00000578027 74 ntBASIC17.28■□□□□ 0.36
SLC1A1P43005 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC1A1P43005 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A1P43005 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A1P43005 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC1A1P43005 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A1P43005 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC1A1P43005 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A1P43005 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SLC1A1P43005 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC1A1P43005 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms