Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 BTBD6P1-201ENST00000412176 1267 ntBASIC28.52■■■□□ 2.16
NCAPD3P42695 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC28.52■■■□□ 2.16
NCAPD3P42695 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
NCAPD3P42695 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC28.52■■■□□ 2.16
NCAPD3P42695 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC28.52■■■□□ 2.16
NCAPD3P42695 LDHBP1-201ENST00000455730 1119 ntBASIC28.52■■■□□ 2.16
NCAPD3P42695 APOA2-204ENST00000464492 530 ntTSL 3 BASIC28.52■■■□□ 2.16
NCAPD3P42695 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC28.52■■■□□ 2.16
NCAPD3P42695 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC28.52■■■□□ 2.16
NCAPD3P42695 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.52■■■□□ 2.16
NCAPD3P42695 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC28.52■■■□□ 2.16
NCAPD3P42695 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
NCAPD3P42695 AL391256.1-201ENST00000443260 1855 ntBASIC28.51■■■□□ 2.16
NCAPD3P42695 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
NCAPD3P42695 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC28.51■■■□□ 2.15
NCAPD3P42695 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 C2orf27AP3-201ENST00000434123 579 ntBASIC28.51■■■□□ 2.15
NCAPD3P42695 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
NCAPD3P42695 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC28.51■■■□□ 2.15
NCAPD3P42695 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
NCAPD3P42695 HNRNPA1P48-202ENST00000565308 961 ntBASIC28.51■■■□□ 2.15
NCAPD3P42695 AL691432.1-201ENST00000596308 1422 ntBASIC28.51■■■□□ 2.15
NCAPD3P42695 AL354718.3-201ENST00000616414 581 ntBASIC28.51■■■□□ 2.15
NCAPD3P42695 CR382287.1-201ENST00000623954 586 ntBASIC28.51■■■□□ 2.15
NCAPD3P42695 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
NCAPD3P42695 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC28.51■■■□□ 2.15
NCAPD3P42695 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
NCAPD3P42695 REXO1L8P-201ENST00000604378 1897 ntBASIC28.5■■■□□ 2.15
NCAPD3P42695 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
NCAPD3P42695 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
NCAPD3P42695 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
NCAPD3P42695 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC28.5■■■□□ 2.15
NCAPD3P42695 CSH2-202ENST00000345366 598 ntTSL 5 BASIC28.5■■■□□ 2.15
NCAPD3P42695 GUK1-206ENST00000366723 845 ntTSL 5 BASIC28.5■■■□□ 2.15
NCAPD3P42695 AC104457.1-201ENST00000401024 814 ntBASIC28.5■■■□□ 2.15
NCAPD3P42695 MTX1P1-201ENST00000440904 838 ntBASIC28.5■■■□□ 2.15
NCAPD3P42695 ACR-203ENST00000529621 708 ntTSL 5 BASIC28.5■■■□□ 2.15
NCAPD3P42695 AC078819.1-201ENST00000547454 765 ntBASIC28.5■■■□□ 2.15
NCAPD3P42695 AC012085.1-201ENST00000548270 765 ntBASIC28.5■■■□□ 2.15
NCAPD3P42695 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC28.5■■■□□ 2.15
NCAPD3P42695 AC020914.3-201ENST00000594712 304 ntBASIC28.5■■■□□ 2.15
NCAPD3P42695 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC28.5■■■□□ 2.15
NCAPD3P42695 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
NCAPD3P42695 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
NCAPD3P42695 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
NCAPD3P42695 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
NCAPD3P42695 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
NCAPD3P42695 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC28.5■■■□□ 2.15
NCAPD3P42695 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
NCAPD3P42695 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC28.49■■■□□ 2.15
NCAPD3P42695 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC28.49■■■□□ 2.15
NCAPD3P42695 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
NCAPD3P42695 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
NCAPD3P42695 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
NCAPD3P42695 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
NCAPD3P42695 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
NCAPD3P42695 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
NCAPD3P42695 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC28.49■■■□□ 2.15
NCAPD3P42695 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC28.49■■■□□ 2.15
NCAPD3P42695 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC28.49■■■□□ 2.15
NCAPD3P42695 AC128714.1-201ENST00000637035 887 ntBASIC28.49■■■□□ 2.15
NCAPD3P42695 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NCAPD3P42695 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NCAPD3P42695 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
NCAPD3P42695 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NCAPD3P42695 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC28.48■■■□□ 2.15
NCAPD3P42695 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
NCAPD3P42695 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
NCAPD3P42695 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
NCAPD3P42695 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC28.48■■■□□ 2.15
NCAPD3P42695 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC28.48■■■□□ 2.15
NCAPD3P42695 RN7SL769P-201ENST00000469386 295 ntBASIC28.48■■■□□ 2.15
NCAPD3P42695 SLED1-202ENST00000512051 380 ntBASIC28.48■■■□□ 2.15
NCAPD3P42695 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC28.48■■■□□ 2.15
NCAPD3P42695 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC28.48■■■□□ 2.15
NCAPD3P42695 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC28.48■■■□□ 2.15
NCAPD3P42695 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NCAPD3P42695 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC28.48■■■□□ 2.15
NCAPD3P42695 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC28.48■■■□□ 2.15
NCAPD3P42695 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
NCAPD3P42695 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
NCAPD3P42695 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC28.48■■■□□ 2.15
NCAPD3P42695 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms