Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMGCLP35914 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMGCLP35914 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCLP35914 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HMGCLP35914 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 SPCS2P4-201ENST00000436160 681 ntBASIC16.41■□□□□ 0.22
HMGCLP35914 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.41■□□□□ 0.22
HMGCLP35914 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCLP35914 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCLP35914 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCLP35914 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCLP35914 AC027307.2-201ENST00000591252 911 ntBASIC16.41■□□□□ 0.22
HMGCLP35914 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.41■□□□□ 0.22
HMGCLP35914 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 AL513210.1-201ENST00000629608 234 ntBASIC16.41■□□□□ 0.22
HMGCLP35914 AC084121.4-201ENST00000641598 221 ntBASIC16.41■□□□□ 0.22
HMGCLP35914 AF228730.8-201ENST00000642140 221 ntBASIC16.41■□□□□ 0.22
HMGCLP35914 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCLP35914 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCLP35914 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 REXO1L8P-201ENST00000604378 1897 ntBASIC16.41■□□□□ 0.22
HMGCLP35914 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCLP35914 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCLP35914 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCLP35914 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCLP35914 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 MTHFR-217ENST00000641820 1569 ntBASIC16.4■□□□□ 0.22
HMGCLP35914 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 MIR346-201ENST00000362234 95 ntBASIC16.4■□□□□ 0.22
HMGCLP35914 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGCLP35914 AP000344.2-201ENST00000512987 629 ntBASIC16.4■□□□□ 0.22
HMGCLP35914 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGCLP35914 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGCLP35914 AC022145.2-201ENST00000598203 171 ntBASIC16.4■□□□□ 0.22
HMGCLP35914 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.4■□□□□ 0.22
HMGCLP35914 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.4■□□□□ 0.22
HMGCLP35914 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCLP35914 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMGCLP35914 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGCLP35914 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCLP35914 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMGCLP35914 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCLP35914 AL592424.1-201ENST00000563624 1536 ntBASIC16.4■□□□□ 0.22
HMGCLP35914 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HMGCLP35914 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
HMGCLP35914 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
HMGCLP35914 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMGCLP35914 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
HMGCLP35914 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
HMGCLP35914 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms