Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PDE6BP35913 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.14■□□□□ 0.82
PDE6BP35913 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PDE6BP35913 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.14■□□□□ 0.81
PDE6BP35913 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.14■□□□□ 0.81
PDE6BP35913 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 AC018665.1-201ENST00000622927 1362 ntBASIC20.14■□□□□ 0.81
PDE6BP35913 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.14■□□□□ 0.81
PDE6BP35913 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.14■□□□□ 0.81
PDE6BP35913 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
PDE6BP35913 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.14■□□□□ 0.81
PDE6BP35913 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PDE6BP35913 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.14■□□□□ 0.81
PDE6BP35913 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.14■□□□□ 0.81
PDE6BP35913 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.14■□□□□ 0.81
PDE6BP35913 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.14■□□□□ 0.81
PDE6BP35913 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDE6BP35913 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PDE6BP35913 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.14■□□□□ 0.81
PDE6BP35913 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6BP35913 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.13■□□□□ 0.81
PDE6BP35913 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.13■□□□□ 0.81
PDE6BP35913 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 CROCCP2-202ENST00000412962 2773 ntBASIC20.13■□□□□ 0.81
PDE6BP35913 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.13■□□□□ 0.81
PDE6BP35913 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 LTB4R2-202ENST00000528054 3092 ntBASIC20.13■□□□□ 0.81
PDE6BP35913 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.13■□□□□ 0.81
PDE6BP35913 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 AL583810.1-201ENST00000553344 1045 ntBASIC20.13■□□□□ 0.81
PDE6BP35913 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.13■□□□□ 0.81
PDE6BP35913 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
PDE6BP35913 RPSAP52-203ENST00000622976 1023 ntBASIC20.13■□□□□ 0.81
PDE6BP35913 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.13■□□□□ 0.81
PDE6BP35913 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PDE6BP35913 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
PDE6BP35913 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 HTR7P1-202ENST00000624664 4411 ntBASIC20.13■□□□□ 0.81
PDE6BP35913 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDE6BP35913 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6BP35913 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.12■□□□□ 0.81
PDE6BP35913 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.12■□□□□ 0.81
PDE6BP35913 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6BP35913 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.12■□□□□ 0.81
PDE6BP35913 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDE6BP35913 HIST3H2BA-201ENST00000436555 524 ntBASIC20.12■□□□□ 0.81
PDE6BP35913 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.12■□□□□ 0.81
PDE6BP35913 SLC25A47P1-201ENST00000531577 414 ntBASIC20.12■□□□□ 0.81
PDE6BP35913 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.12■□□□□ 0.81
PDE6BP35913 RN7SL219P-201ENST00000582872 296 ntBASIC20.12■□□□□ 0.81
PDE6BP35913 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.12■□□□□ 0.81
PDE6BP35913 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.12■□□□□ 0.81
PDE6BP35913 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms